Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL29169.1 | KJL29170.1 | RS83_01795 | RS83_01796 | Hypothetical protein. | Putative cyclase. | 0.565 |
KJL29169.1 | KJL29171.1 | RS83_01795 | RS83_01797 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.432 |
KJL29169.1 | ktrA | RS83_01795 | RS83_01791 | Hypothetical protein. | Ktr system potassium uptake protein A. | 0.442 |
KJL29169.1 | ktrB | RS83_01795 | RS83_01792 | Hypothetical protein. | Ktr system potassium uptake protein B. | 0.442 |
KJL29169.1 | sdpR_2 | RS83_01795 | RS83_01793 | Hypothetical protein. | Transcriptional repressor SdpR. | 0.629 |
KJL29169.1 | sdpR_3 | RS83_01795 | RS83_01794 | Hypothetical protein. | Transcriptional repressor SdpR. | 0.822 |
KJL29170.1 | KJL29169.1 | RS83_01796 | RS83_01795 | Putative cyclase. | Hypothetical protein. | 0.565 |
KJL29170.1 | KJL29171.1 | RS83_01796 | RS83_01797 | Putative cyclase. | Helix-turn-helix domain protein. | 0.578 |
KJL29170.1 | sdpR_2 | RS83_01796 | RS83_01793 | Putative cyclase. | Transcriptional repressor SdpR. | 0.555 |
KJL29170.1 | sdpR_3 | RS83_01796 | RS83_01794 | Putative cyclase. | Transcriptional repressor SdpR. | 0.626 |
KJL29171.1 | KJL29169.1 | RS83_01797 | RS83_01795 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.432 |
KJL29171.1 | KJL29170.1 | RS83_01797 | RS83_01796 | Helix-turn-helix domain protein. | Putative cyclase. | 0.578 |
KJL29171.1 | ktrA | RS83_01797 | RS83_01791 | Helix-turn-helix domain protein. | Ktr system potassium uptake protein A. | 0.554 |
KJL29171.1 | ktrB | RS83_01797 | RS83_01792 | Helix-turn-helix domain protein. | Ktr system potassium uptake protein B. | 0.519 |
KJL29171.1 | sdpR_2 | RS83_01797 | RS83_01793 | Helix-turn-helix domain protein. | Transcriptional repressor SdpR. | 0.449 |
KJL29171.1 | sdpR_3 | RS83_01797 | RS83_01794 | Helix-turn-helix domain protein. | Transcriptional repressor SdpR. | 0.483 |
arsR_1 | sdpR_3 | RS83_01601 | RS83_01794 | Arsenical resistance operon repressor. | Transcriptional repressor SdpR. | 0.478 |
arsR_2 | sdpR_3 | RS83_03371 | RS83_01794 | Arsenical resistance operon repressor. | Transcriptional repressor SdpR. | 0.501 |
ktrA | KJL29169.1 | RS83_01791 | RS83_01795 | Ktr system potassium uptake protein A. | Hypothetical protein. | 0.442 |
ktrA | KJL29171.1 | RS83_01791 | RS83_01797 | Ktr system potassium uptake protein A. | Helix-turn-helix domain protein. | 0.554 |
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