Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL27566.1 | KJL27568.1 | RS83_02615 | RS83_02617 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL27566.1 | KJL28118.1 | RS83_02615 | RS83_03183 | Hypothetical protein. | Hypothetical protein. | 0.566 |
KJL27566.1 | KJL28360.1 | RS83_02615 | RS83_03431 | Hypothetical protein. | Hypothetical protein. | 0.555 |
KJL27566.1 | dnaE | RS83_02615 | RS83_02618 | Hypothetical protein. | DNA polymerase III subunit alpha. | 0.580 |
KJL27566.1 | rpoA | RS83_02615 | RS83_01326 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.502 |
KJL27566.1 | rpoB | RS83_02615 | RS83_01856 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta. | 0.540 |
KJL27566.1 | rpoC | RS83_02615 | RS83_01857 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.549 |
KJL27566.1 | rpoZ | RS83_02615 | RS83_02983 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.487 |
KJL27566.1 | sigE_2 | RS83_02615 | RS83_02614 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.814 |
KJL27566.1 | sigW_2 | RS83_02615 | RS83_02616 | Hypothetical protein. | ECF RNA polymerase sigma factor SigW. | 0.814 |
KJL27568.1 | KJL27566.1 | RS83_02617 | RS83_02615 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL27568.1 | dnaE | RS83_02617 | RS83_02618 | Hypothetical protein. | DNA polymerase III subunit alpha. | 0.580 |
KJL27568.1 | sigE_2 | RS83_02617 | RS83_02614 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
KJL27568.1 | sigW_2 | RS83_02617 | RS83_02616 | Hypothetical protein. | ECF RNA polymerase sigma factor SigW. | 0.773 |
KJL28118.1 | KJL27566.1 | RS83_03183 | RS83_02615 | Hypothetical protein. | Hypothetical protein. | 0.566 |
KJL28118.1 | sigE_2 | RS83_03183 | RS83_02614 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.566 |
KJL28118.1 | sigW_2 | RS83_03183 | RS83_02616 | Hypothetical protein. | ECF RNA polymerase sigma factor SigW. | 0.566 |
KJL28360.1 | KJL27566.1 | RS83_03431 | RS83_02615 | Hypothetical protein. | Hypothetical protein. | 0.555 |
KJL28360.1 | sigE_2 | RS83_03431 | RS83_02614 | Hypothetical protein. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.555 |
KJL28360.1 | sigW_2 | RS83_03431 | RS83_02616 | Hypothetical protein. | ECF RNA polymerase sigma factor SigW. | 0.555 |
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