Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL27614.1 | KJL27671.1 | RS83_02665 | RS83_02723 | Tetratrico peptide repeat protein. | Major Facilitator Superfamily protein. | 0.421 |
KJL27671.1 | KJL27614.1 | RS83_02723 | RS83_02665 | Major Facilitator Superfamily protein. | Tetratrico peptide repeat protein. | 0.421 |
KJL27671.1 | KJL29186.1 | RS83_02723 | RS83_01812 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.478 |
KJL27671.1 | hpcE_1 | RS83_02723 | RS83_02065 | Major Facilitator Superfamily protein. | Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase. | 0.429 |
KJL27671.1 | rpsT | RS83_02723 | RS83_02722 | Major Facilitator Superfamily protein. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.585 |
KJL29186.1 | KJL27671.1 | RS83_01812 | RS83_02723 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.478 |
hpcE_1 | KJL27671.1 | RS83_02065 | RS83_02723 | Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase. | Major Facilitator Superfamily protein. | 0.429 |
rpsT | KJL27671.1 | RS83_02722 | RS83_02723 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | Major Facilitator Superfamily protein. | 0.585 |