Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL27562.1 | KJL28051.1 | RS83_02611 | RS83_03116 | Cell wall synthesis protein Wag31. | Hypothetical protein. | 0.688 |
KJL27562.1 | KJL28443.1 | RS83_02611 | RS83_03515 | Cell wall synthesis protein Wag31. | Phosphotransferase enzyme family protein. | 0.547 |
KJL27562.1 | KJL28664.1 | RS83_02611 | RS83_02139 | Cell wall synthesis protein Wag31. | Hypothetical protein. | 0.444 |
KJL27562.1 | rpsD | RS83_02611 | RS83_02961 | Cell wall synthesis protein Wag31. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.447 |
KJL28047.1 | KJL28051.1 | RS83_03112 | RS83_03116 | Hypothetical protein. | Hypothetical protein. | 0.727 |
KJL28047.1 | KJL28443.1 | RS83_03112 | RS83_03515 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.641 |
KJL28047.1 | KJL28664.1 | RS83_03112 | RS83_02139 | Hypothetical protein. | Hypothetical protein. | 0.658 |
KJL28051.1 | KJL27562.1 | RS83_03116 | RS83_02611 | Hypothetical protein. | Cell wall synthesis protein Wag31. | 0.688 |
KJL28051.1 | KJL28047.1 | RS83_03116 | RS83_03112 | Hypothetical protein. | Hypothetical protein. | 0.727 |
KJL28051.1 | KJL28443.1 | RS83_03116 | RS83_03515 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.772 |
KJL28051.1 | KJL28664.1 | RS83_03116 | RS83_02139 | Hypothetical protein. | Hypothetical protein. | 0.760 |
KJL28051.1 | KJL30013.1 | RS83_03116 | RS83_01154 | Hypothetical protein. | Sortase family protein. | 0.657 |
KJL28051.1 | cdsA | RS83_03116 | RS83_03117 | Hypothetical protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.960 |
KJL28051.1 | frr | RS83_03116 | RS83_03118 | Hypothetical protein. | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.958 |
KJL28051.1 | pyrH | RS83_03116 | RS83_03119 | Hypothetical protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.808 |
KJL28051.1 | rpsD | RS83_03116 | RS83_02961 | Hypothetical protein. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.720 |
KJL28051.1 | tsf | RS83_03116 | RS83_03120 | Hypothetical protein. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.639 |
KJL28443.1 | KJL27562.1 | RS83_03515 | RS83_02611 | Phosphotransferase enzyme family protein. | Cell wall synthesis protein Wag31. | 0.547 |
KJL28443.1 | KJL28047.1 | RS83_03515 | RS83_03112 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.641 |
KJL28443.1 | KJL28051.1 | RS83_03515 | RS83_03116 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.772 |
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