Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL28125.1 | KJL28415.1 | RS83_03191 | RS83_03486 | Hypothetical protein. | Hypothetical protein. | 0.710 |
KJL28411.1 | KJL28412.1 | RS83_03482 | RS83_03483 | Hypothetical protein. | Undecaprenyl-phosphate mannosyltransferase. | 0.628 |
KJL28411.1 | KJL28413.1 | RS83_03482 | RS83_03484 | Hypothetical protein. | Hypothetical protein. | 0.621 |
KJL28411.1 | KJL28414.1 | RS83_03482 | RS83_03485 | Hypothetical protein. | Glycosyl transferase family 2. | 0.629 |
KJL28411.1 | KJL28415.1 | RS83_03482 | RS83_03486 | Hypothetical protein. | Hypothetical protein. | 0.666 |
KJL28411.1 | rfbC | RS83_03482 | RS83_03479 | Hypothetical protein. | Putative dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.642 |
KJL28411.1 | rmlA | RS83_03482 | RS83_03481 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.581 |
KJL28411.1 | rmlB | RS83_03482 | RS83_03480 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.600 |
KJL28412.1 | KJL28411.1 | RS83_03483 | RS83_03482 | Undecaprenyl-phosphate mannosyltransferase. | Hypothetical protein. | 0.628 |
KJL28412.1 | KJL28413.1 | RS83_03483 | RS83_03484 | Undecaprenyl-phosphate mannosyltransferase. | Hypothetical protein. | 0.967 |
KJL28412.1 | KJL28414.1 | RS83_03483 | RS83_03485 | Undecaprenyl-phosphate mannosyltransferase. | Glycosyl transferase family 2. | 0.872 |
KJL28412.1 | KJL28415.1 | RS83_03483 | RS83_03486 | Undecaprenyl-phosphate mannosyltransferase. | Hypothetical protein. | 0.818 |
KJL28412.1 | KJL29298.1 | RS83_03483 | RS83_01927 | Undecaprenyl-phosphate mannosyltransferase. | NAD dependent epimerase/dehydratase family protein. | 0.480 |
KJL28412.1 | rfbC | RS83_03483 | RS83_03479 | Undecaprenyl-phosphate mannosyltransferase. | Putative dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.740 |
KJL28412.1 | rmlA | RS83_03483 | RS83_03481 | Undecaprenyl-phosphate mannosyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.696 |
KJL28412.1 | rmlB | RS83_03483 | RS83_03480 | Undecaprenyl-phosphate mannosyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.688 |
KJL28413.1 | KJL28411.1 | RS83_03484 | RS83_03482 | Hypothetical protein. | Hypothetical protein. | 0.621 |
KJL28413.1 | KJL28412.1 | RS83_03484 | RS83_03483 | Hypothetical protein. | Undecaprenyl-phosphate mannosyltransferase. | 0.967 |
KJL28413.1 | KJL28414.1 | RS83_03484 | RS83_03485 | Hypothetical protein. | Glycosyl transferase family 2. | 0.858 |
KJL28413.1 | KJL28415.1 | RS83_03484 | RS83_03486 | Hypothetical protein. | Hypothetical protein. | 0.789 |
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