STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91512.1Putative protein (tandem DUF1508 domains); Pfam matches to PF07411.8 DUF1508, and to PF07411.8 DUF1508; draft locus tag CAMGR0001_0321. (120 aa)    
Predicted Functional Partners:
AKT93051.1
Peptidoglycan-binding protein LysM (BON domain); Pfam matches to PF01476.16 LysM, and to PF04972.13 BON; draft locus tag CAMGR0001_1815.
  
   0.981
AKT92080.1
Phage tail sheath protein FI; Draft locus tag CAMGR0001_1651.
   
 
 0.959
AKT92073.1
Phage baseplate assembly protein W; Pfam match to PF04965.10 GPW_gp25; draft locus tag CAMGR0001_1657.
   
   0.955
AKT92087.1
Phage protein D; Draft locus tag CAMGR0001_1643.
   
   0.950
AKT91511.1
Hypothetical protein; Draft locus tag CAMGR0001_0320.
       0.773
AKT91513.1
Hypothetical protein; Draft locus tag CAMGR0001_0323.
       0.538
AKT92072.1
Phage baseplate assembly protein V; Pfam match to PF04717.8 Phage_base_V; draft locus tag CAMGR0001_1658.
   
   0.533
AKT93000.1
Alpha/beta hydrolase family protein; Pfam match to PF00756.16 Esterase; draft locus tag CAMGR0001_0684.
  
     0.417
AKT92143.1
Von Willebrand factor type A (vWA) domain protein; Pfam match to PF05762.10 VWA_CoxE; draft locus tag CAMGR0001_1563.
  
     0.401
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.