STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91517.1Hypothetical membrane protein (DUF3137 domain); Pfam match to PF11335.4 DUF3137; draft locus tag CAMGR0001_0327. (468 aa)    
Predicted Functional Partners:
thiG
ThiGH complex, thiazole synthase subunit ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
   
  
 0.505
thiC
HMP-P synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
   
  
 0.491
lemA
LemA protein; Pfam match to PF04011.8 LemA; draft locus tag CAMGR0001_0356.
 
     0.467
AKT91515.1
Putative protein (DUF3737 domain); Pfam match to PF12541.4 DUF3737; draft locus tag CAMGR0001_0325.
       0.455
patB
Putative PLP-dependent C-S lyase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_0326.
       0.455
thiD
Hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase; Bifunctional; Pfam matches to PF08543.8 Phos_pyr_kin, and to PF08543.8 Phos_pyr_kin; draft locus tag CAMGR0001_0138.
   
  
 0.451
eptC
Phosphoethanolamine transferase; Pfam matches to PF08019.8 DUF1705, and to PF00884.19 Sulfatase; draft locus tags CAMGR0001_0878 and CAMGR0001_0879.
  
     0.444
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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