STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase/aminotransferase (IscS/NifS); Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_0102. (397 aa)    
Predicted Functional Partners:
iscU
Iron-sulfur cluster assembly scaffold protein IscU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 0.999
AKT92120.1
ThiF family protein; Pfam match to PF00899.17 ThiF; draft locus tag CAMGR0001_1597.
   
 0.991
yedF
Selenium metabolism protein; Pfam match to PF01206.13 TusA; draft locus tag CAMGR0001_1852; Belongs to the sulfur carrier protein TusA family.
   
 
 0.959
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.937
selD
Selenophosphate synthetase; Pfam matches to PF02769.18 AIRS_C, and to PF00586.20 AIRS; draft locus tag CAMGR0001_1851.
    
 0.885
AKT92350.1
Transcriptional regulator, BadM/Rrf2 family; Pfam match to PF02082.16 Rrf2; draft locus tag CAMGR0001_1267.
  
  
 0.790
AKT92540.1
Transcriptional regulator, IscR family; Pfam match to PF02082.16 Rrf2; draft locus tag CAMGR0001_0999.
  
  
 0.790
AKT92846.1
DnaJ-like membrane chaperone protein (N-terminal terB-like domain); Pfam matches to PF00226.27 DnaJ, and to PF05099.9 TerB; draft locus tag CAMGR0001_1928.
  
 
 0.690
fdhD
Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
 0.667
dnaK
DnaK system heat shock chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
  
 0.624
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.