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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91573.1Putative universal stress protein UspA; Pfam match to PF00582.22 Usp; draft locus tag CAMGR0001_0076. (284 aa)    
Predicted Functional Partners:
purD
Phosphoribosylamine-glycine ligase; Pfam matches to PF01071.15 GARS_A, and to PF02844.11 GARS_N, and to PF02843.12 GARS_C; draft locus tag CAMGR0001_0081; Belongs to the GARS family.
     
 0.755
lptD
Putative lipooligosaccharide transport system, OM component (LptD family); Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
     
 0.747
AKT91571.1
Putative protein, putative phosphoribosyltransferase; Pfam match to PF00156.23 Pribosyltran; draft locus tag CAMGR0001_0078.
  
  
 0.747
pnp
Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
     
 0.743
AKT91569.1
Putative protein (RDD domain); Pfam match to PF06271.8 RDD; draft locus tag CAMGR0001_0080.
       0.740
hemD
Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.518
AKT92946.1
Putative lipid-binding protein (SYLF/DUF500 domain); Pfam match to PF04366.8 Ysc84; draft locus tag CAMGR0001_2036.
  
     0.509
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pfam matches to PF00999.17 Na_H_Exchanger, and to PF02254.14 TrkA_N; draft locus tag CAMGR0001_0715.
  
  
 0.461
raiA
Translation inhibitor protein RaiA; Pfam matches to PF02482.15 Ribosomal_S30AE, and to PF16321.1 Ribosom_S30AE_C; draft locus tag CAMGR0001_2799.
   
  
 0.442
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.