STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepE1(alpha)-aspartyl dipeptidase; Pfam match to PF03575.13 Peptidase_S51; draft locus tag CAMGR0001_0059. (232 aa)    
Predicted Functional Partners:
AKT92528.1
Pfam match to PF03575.13 Peptidase_S51; draft locus tag CAMGR0001_1021.
  
     0.773
AKT91585.1
Peptidase family M20/M25/M40, putative N-carbamoyl-L-amino acid amidohydrolase; Pfam matches to PF01546.24 Peptidase_M20, and to PF07687.10 M20_dimer; draft locus tag CAMGR0001_0060.
       0.760
AKT91587.1
Putative C4-dicarboxylate transporter, DcuC family; Pfam match to PF03606.11 DcuC; draft locus tag CAMGR0001_0058.
       0.752
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
   
 
 0.750
AKT91584.1
Peptidase family M20/M25/M40, putative N-carbamoyl-L-amino acid amidohydrolase; Pfam match to PF01546.24 Peptidase_M20; draft locus tag CAMGR0001_0061.
       0.744
AKT91583.1
Hypothetical protein; Draft locus tag CAMGR0001_0063.
       0.447
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.