STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91594.1TRAP-type transport system, large permease; Pfam match to PF06808.8 DctM; draft locus tag CAMGR0001_0047. (453 aa)    
Predicted Functional Partners:
AKT91593.1
TRAP-type transport system, small permease; Pfam match to PF04290.8 DctQ; draft locus tag CAMGR0001_0049.
 
  
 0.912
AKT92347.1
TRAP-type transporter, periplasmic substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.809
AKT92397.1
TRAP-type transporter, periplasmic substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.790
pycB
Pyruvate carboxylase, subunit B; Pfam matches to PF02436.14 PYC_OADA, and to PF00364.18 Biotin_lipoyl, and to PF00682.15 HMGL-like; draft locus tag CAMGR0001_0046.
       0.679
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.420
AKT91597.1
SCP-like extracellular protein; Pfam match to PF00188.22 CAP; draft locus tag CAMGR0001_0043.
       0.412
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.