STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91618.1Prohibitin family protein, SPFH superfamily; Pfam match to PF01145.21 Band_7; draft locus tag CAMGR0001_0018. (359 aa)    
Predicted Functional Partners:
ftsH1
Integral membrane ATP-dependent zinc metallopeptidase; Pfam matches to PF00004.25 AAA, and to PF01434.14 Peptidase_M41; draft locus tags CAMGR0001_1122 and CAMGR0001_1123; Belongs to the AAA ATPase family.
   
 0.848
ftsH2
Integral membrane ATP-dependent zinc metallopeptidase; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.848
ilvE
Branched-chain amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
    0.800
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
  
   
 0.722
AKT91824.1
Putative protein (DUF507 domain); Pfam match to PF04368.9 DUF507; draft locus tag CAMGR0001_2632.
  
     0.690
petC
Ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit; Pfam match to PF00034.17 Cytochrom_C; draft locus tag CAMGR0001_1836.
  
   0.676
AKT93149.1
Competence protein, ComEC family; Pfam match to PF03772.12 Competence; draft locus tag CAMGR0001_2877.
 
     0.655
atpF-2
ATP synthase, F0 complex, b subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
    0.648
AKT92157.1
Fibronectin type III domain-containing protein; Pfam match to PF00041.17 fn3; draft locus tag CAMGR0001_1544.
  
     0.623
AKT92454.1
Putative protein (putative TrkA domain); Pfam match to PF02080.17 TrkA_C; draft locus tag CAMGR0001_1127.
  
     0.615
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.