STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91662.1Putative nucleotidyltransferase, UPF0157 family; Pfam match to PF04229.10 GrpB; draft locus tag CAMGR0001_0624. (182 aa)    
Predicted Functional Partners:
AKT91663.1
Putative membrane protein; Draft locus tag CAMGR0001_2759.
       0.480
AKT91664.1
Hypothetical protein; Draft locus tag CAMGR0001_2760.
       0.480
AKT91665.1
Putative baseplate hub subunit and tail lysozyme; Draft locus tag CAMGR0001_2761.
       0.480
AKT91666.1
Hypothetical protein; Draft locus tag CAMGR0001_2762.
       0.480
AKT91667.1
Putative membrane protein; Pfam match to PF16083.1 Phage_holin_3_3; draft locus tag CAMGR0001_2763.
       0.480
AKT93019.1
Putative protein (DUF4272 domain); Pfam match to PF14094.2 DUF4272; draft locus tag CAMGR0001_1774.
  
     0.464
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.407
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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