STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91709.1DNA single-strand annealing protein, RecT family; Pfam match to PF03837.10 RecT; draft locus tag CAMGR0001_2140. (328 aa)    
Predicted Functional Partners:
AKT91708.1
Putative exonuclease VIII; Pfam match to PF12684.3 DUF3799; draft locus tag CAMGR0001_2139.
 
  
 0.912
AKT91714.1
Site-specific DNA-methyltransferase; Draft locus tag CAMGR0001_2144.
 
     0.875
ssb-2
Single-stranded DNA-binding protein; Pfam match to PF00436.21 SSB; draft locus tag CAMGR0001_2141.
     
 0.786
AKT91707.1
Putative protein (DUF1351 domain); Pfam match to PF07083.7 DUF1351; draft locus tag CAMGR0001_2138.
       0.762
AKT91711.1
Hypothetical protein.
       0.757
AKT91712.1
Hypothetical protein; Draft locus tag CAMGR0001_2142.
       0.757
AKT91713.1
Hypothetical protein; Draft locus tag CAMGR0001_2143.
       0.757
cas5
CRISPR/Cas system-associated RAMP protein Cas5, type I-B/HMARI; Pfam match to PF09704.6 Cas_Cas5d; draft locus tag CAMGR0001_2373.
  
     0.658
cas2b
CRISPR/Cas system-associated endoribonuclease Cas2, type I-B/HMARI; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
     0.592
AKT93335.1
Aldolase/citrate lyase family protein; Pfam match to PF03328.10 HpcH_HpaI; draft locus tag CAMGR0001_0396; Belongs to the HpcH/HpaI aldolase family.
  
     0.556
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.