STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tktTransketolase; Pfam matches to PF00456.17 Transketolase_N, and to PF02779.20 Transket_pyr, and to PF02780.16 Transketolase_C; draft locus tag CAMGR0001_2754; Belongs to the transketolase family. (642 aa)    
Predicted Functional Partners:
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 0.994
rpe
Ribulose phosphate 3-epimerase; Pfam match to PF00834.15 Ribul_P_3_epim; draft locus tag CAMGR0001_2826; Belongs to the ribulose-phosphate 3-epimerase family.
 0.987
pgi
Phosphoglucose isomerase; Pfam match to PF00342.15 PGI; draft locus tag CAMGR0001_1723.
 
 0.979
fbaA
Fructose-bisphosphate aldolase, class IIA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.958
fbp
Fructose-1,6-bisphosphatase I; Pfam match to PF00316.16 FBPase; draft locus tag CAMGR0001_1475; Belongs to the FBPase class 1 family.
  
 
 0.957
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 
 0.950
gapA
Glyceraldehyde 3-phosphate dehydrogenase A; Pfam matches to PF02800.16 Gp_dh_C, and to PF00044.20 Gp_dh_N; draft locus tag CAMGR0001_2030; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.936
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 0.928
pykF
Pyruvate kinase I; Pfam matches to PF00224.17 PK, and to PF02887.12 PK_C; draft locus tag CAMGR0001_1206; Belongs to the pyruvate kinase family.
  
 0.926
tpiA
Triosephosphate isomerase; Pfam match to PF00121.14 TIM; draft locus tag CAMGR0001_2028.
 
 0.925
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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