STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91747.1Putative protein (DUF86 domain); Pfam match to PF01934.13 DUF86; draft locus tag CAMGR0001_2724. (118 aa)    
Predicted Functional Partners:
AKT91748.1
Nucleotidyl transferase domain protein; Pfam match to PF01909.19 NTP_transf_2; draft locus tag CAMGR0001_2723.
  
  
 0.809
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.762
AKT91745.1
Putative protein (DUF488 domain); Pfam match to PF04343.9 DUF488; draft locus tag CAMGR0001_2726.
       0.708
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.686
AKT91750.1
Putative protein (DUF748 domains); Pfam matches to PF05359.7 DUF748, and to PF05359.7 DUF748, and to PF05359.7 DUF748; draft locus tag CAMGR0001_2721.
       0.551
AKT91744.1
Hypothetical protein; Draft locus tag CAMGR0001_2727.
       0.503
queH
Putative protein (DUF208 domain); Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.410
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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