STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91807.1Aspartate aminotransferase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_2655. (401 aa)    
Predicted Functional Partners:
hom
Pfam matches to PF00742.15 Homoserine_dh, and to PF03447.12 NAD_binding_3, and to PF01842.21 ACT; draft locus tag CAMGR0001_2654.
  
 
 0.848
AKT91809.1
Putative protein (UPF0102 domain); Pfam match to PF02021.13 UPF0102; draft locus tag CAMGR0001_2653; Belongs to the UPF0102 family.
       0.800
trx
Thioredoxin; Pfam match to PF00085.16 Thioredoxin; draft locus tag CAMGR0001_2652; Belongs to the thioredoxin family.
     
 0.630
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
  
  
 0.540
aas
Bifunctional; Pfam matches to PF00501.24 AMP-binding, and to PF01553.17 Acyltransferase, and to PF07690.12 MFS_1; draft locus tag CAMGR0001_2165.
  
  
 0.496
trxB
Thioredoxin reductase; Pfam match to PF07992.10 Pyr_redox_2; draft locus tag CAMGR0001_2651.
  
  
 0.486
trpDG
Anthranilate phosphoribosyltransferase / anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
     
 0.456
AKT91742.1
Flavodoxin-like fold domain protein, putative NAD(P)H (quinone) dehydrogenase/reductase; Pfam match to PF02525.13 Flavodoxin_2; draft locus tag CAMGR0001_2730.
   
    0.416
AKT92129.1
Flavodoxin-like fold domain protein, putative NAD(P)H (quinone) dehydrogenase/reductase; Pfam match to PF02525.13 Flavodoxin_2; draft locus tag CAMGR0001_1586.
   
    0.416
AKT92506.1
Flavodoxin-like fold domain protein, putative NAD(P)H (quinone) dehydrogenase/reductase; Pfam match to PF02525.13 Flavodoxin_2; draft locus tag CAMGR0001_1055.
   
    0.416
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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