STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase; Pfam match to PF07992.10 Pyr_redox_2; draft locus tag CAMGR0001_2651. (314 aa)    
Predicted Functional Partners:
trx
Thioredoxin; Pfam match to PF00085.16 Thioredoxin; draft locus tag CAMGR0001_2652; Belongs to the thioredoxin family.
 
 
 0.985
AKT92240.1
NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB; Pfam match to PF07992.10 Pyr_redox_2; draft locus tag CAMGR0001_1438.
  
  
  0.911
selD
Selenophosphate synthetase; Pfam matches to PF02769.18 AIRS_C, and to PF00586.20 AIRS; draft locus tag CAMGR0001_1851.
     
 0.909
ahpC
Alkyl hydroperoxide reductase protein, peroxidase component; Pfam matches to PF00578.17 AhpC-TSA, and to PF10417.5 1-cysPrx_C; draft locus tag CAMGR0001_0503.
  
 
 0.867
iscU
Iron-sulfur cluster assembly scaffold protein IscU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
   
  
 0.663
katA
Catalase; Pfam matches to PF00199.15 Catalase, and to PF06628.8 Catalase-rel; draft locus tag CAMGR0001_1415.
   
 
 0.626
AKT92120.1
ThiF family protein; Pfam match to PF00899.17 ThiF; draft locus tag CAMGR0001_1597.
  
  
 0.604
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
  
 
 0.583
ftsE
Cell division ATP-binding protein FtsE; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_1546.
  
  
 0.566
p19
Ferrirhodotorulic acid ABC transporter, periplasmic binding protein; Pfam match to PF10634.5 Iron_transport; draft locus tag CAMGR0001_1833.
   
    0.535
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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