STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91815.1Lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA; Pfam match to PF04333.9 MlaA; draft locus tag CAMGR0001_2644. (239 aa)    
Predicted Functional Partners:
ttg2D
Lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC; Pfam match to PF05494.8 MlaC; draft locus tag CAMGR0001_2645.
 
 
 
 0.959
AKT91813.1
Putative RND family exporter; Pfam matches to PF03176.11 MMPL, and to PF03176.11 MMPL; draft locus tag CAMGR0001_2646.
 
     0.823
AKT92282.1
Hypothetical protein; Draft locus tag CAMGR0001_1363.
    
 
 0.650
AKT92668.1
Outer membrane porin, OprD family; Pfam match to PF05538.7 Campylo_MOMP; draft locus tag CAMGR0001_0802.
    
 
 0.650
AKT91816.1
Transcriptional regulator, ModE family; Pfam matches to PF03459.13 TOBE, and to PF03459.13 TOBE, and to PF00126.23 HTH_1; draft locus tag CAMGR0001_2643.
 
     0.619
mrdA
Penicillin-binding protein 2; Pfam matches to PF00905.18 Transpeptidase, and to PF03717.11 PBP_dimer; draft locus tag CAMGR0001_2355.
  
     0.495
lptD
Putative lipooligosaccharide transport system, OM component (LptD family); Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.467
AKT91818.1
Molybdenum-pterin binding domain-containing protein; Pfam match to PF03459.13 TOBE; draft locus tag CAMGR0001_2641.
       0.444
AKT91750.1
Putative protein (DUF748 domains); Pfam matches to PF05359.7 DUF748, and to PF05359.7 DUF748, and to PF05359.7 DUF748; draft locus tag CAMGR0001_2721.
  
   
 0.436
modC
Molybdenum ABC transporter ModABC, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2640.
       0.436
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.