STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
addBExonuclease V, helicase AddB; Pfam match to PF12705.3 PDDEXK_1; draft locus tag CAMGR0001_2628. (970 aa)    
Predicted Functional Partners:
addA
Exonuclease V, helicase AddA; Pfam matches to PF00580.17 UvrD-helicase, and to PF13361.2 UvrD_C; draft locus tags CAMGR0001_2626 and CAMGR0001_2627.
 
   
 0.927
AKT93149.1
Competence protein, ComEC family; Pfam match to PF03772.12 Competence; draft locus tag CAMGR0001_2877.
  
     0.701
AKT92454.1
Putative protein (putative TrkA domain); Pfam match to PF02080.17 TrkA_C; draft locus tag CAMGR0001_1127.
  
     0.670
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
  
     0.648
AKT93306.1
Oligosaccharide transferase, STT3 subunit; Pfam match to PF02516.10 STT3; draft locus tag CAMGR0001_0434.
  
     0.646
mqnA2
6-amino-6-deoxyfutalosine synthase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
  
     0.644
AKT91824.1
Putative protein (DUF507 domain); Pfam match to PF04368.9 DUF507; draft locus tag CAMGR0001_2632.
 
     0.636
pglB
Undecaprenyl-diphosphooligosaccharide--protein glycotransferase; Pfam match to PF02516.10 STT3; draft locus tag CAMGR0001_2013.
  
     0.636
AKT92157.1
Fibronectin type III domain-containing protein; Pfam match to PF00041.17 fn3; draft locus tag CAMGR0001_1544.
  
     0.599
atpF-2
ATP synthase, F0 complex, b subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.593
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.