STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadFOuter membrane fibronectin-binding protein; Pfam matches to PF00691.16 OmpA, and to PF13505.2 OMP_b-brl; draft locus tag CAMGR0001_2622. (340 aa)    
Predicted Functional Partners:
tolB
Tol-Pal system translocation protein TolB; Draft locus tag CAMGR0001_2594.
 
 
 0.792
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
   0.642
rpsI
Pfam match to PF00380.15 Ribosomal_S9; draft locus tag CAMGR0001_2624; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.626
AKT91833.1
HAD-superfamily hydrolase, subfamily IA, probable phosphoglycolate phosphatase; Pfam match to PF13419.2 HAD_2; draft locus tag CAMGR0001_2621.
  
  
 0.598
mltD
Membrane-bound lytic murein transglycosylase D; Pfam match to PF01464.16 SLT; draft locus tag CAMGR0001_1133.
 
 
 0.582
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
  
   0.559
yaeT
Beta-barrel assembly machinery complex, BamA/YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.459
lolC
Lipoprotein releasing system, transmembrane protein, LolC/E family; Pfam matches to PF02687.17 FtsX, and to PF12704.3 MacB_PCD; draft locus tag CAMGR0001_0984.
  
 
   0.454
tolQ
Tol-Pal system subunit TolQ; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_2598.
 
   
 0.434
addB
Exonuclease V, helicase AddB; Pfam match to PF12705.3 PDDEXK_1; draft locus tag CAMGR0001_2628.
       0.421
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.