STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT91861.1Adenine nucleotide alpha hydrolase, possible tRNA 2-thiocytidine biosynthesis protein; Pfam match to PF01171.16 ATP_bind_3; draft locus tag CAMGR0001_2588; Belongs to the TtcA family. (249 aa)    
Predicted Functional Partners:
AKT92799.1
Cysteine sulfinate desulfinase; Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_2416.
 
     0.923
csdA
Cysteine sulfinate desulfinase; Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_0455.
 
     0.922
slyD
FKBP-type peptidyl-prolyl cis-trans isomerase; Pfam match to PF00254.24 FKBP_C; draft locus tag CAMGR0001_2591.
 
     0.864
pfs
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
   0.829
fabD
malonyl-CoA-[acp] transacylase; Pfam match to PF00698.17 Acyl_transf_1; draft locus tag CAMGR0001_2590.
  
    0.803
pal
Tol-Pal system peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
   0.677
ybgF
Tol-Pal system protein YbgF; Draft locus tag CAMGR0001_2592.
       0.654
AKT93392.1
ATP-utilizing enzyme (PP-loop superfamily); Pfam match to PF01171.16 ATP_bind_3; draft locus tag CAMGR0001_2182.
 
 
    0.639
tolB
Tol-Pal system translocation protein TolB; Draft locus tag CAMGR0001_2594.
 
   
 0.602
tolQ
Tol-Pal system subunit TolQ; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_2598.
 
    0.567
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.