STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldBAldehyde dehydrogenase B; Pfam match to PF00171.18 Aldedh; draft locus tag CAMGR0001_2585; Belongs to the aldehyde dehydrogenase family. (488 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.937
AKT93539.1
acyl-CoA hydrolase/transferase; Pfam matches to PF13336.2 AcetylCoA_hyd_C, and to PF02550.11 AcetylCoA_hydro; draft locus tag CAMGR0001_0217.
  
 
 0.916
AKT92121.1
Hydrolase, carbon-nitrogen family; Pfam match to PF00795.18 CN_hydrolase; draft locus tag CAMGR0001_1596.
   
 0.915
pta
Phosphate acetyltransferase; Bifunctional; Pfam match to PF01515.15 PTA_PTB; draft locus tag CAMGR0001_1027.
  
 
 0.910
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.909
garK
Glycerate kinase; Pfam match to PF02595.11 Gly_kinase; draft locus tag CAMGR0001_2818; Belongs to the glycerate kinase type-1 family.
   
 
 0.903
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.902
gdhA
Glutamate dehydrogenase; Pfam matches to PF00208.17 ELFV_dehydrog, and to PF02812.14 ELFV_dehydrog_N; draft locus tag CAMGR0001_2704; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.863
glnA
Glutamine synthetase; Pfam matches to PF00120.20 Gln-synt_C, and to PF03951.15 Gln-synt_N; draft locus tag CAMGR0001_2876; Belongs to the glutamine synthetase family.
  
 
 0.863
AKT92677.1
Hypothetical protein; Draft locus tag CAMGR0001_0781.
   
 0.820
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.