STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chuCHeme ABC transporter ChuBCD, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2518. (257 aa)    
Predicted Functional Partners:
chuB
Heme ABC transporter ChuBCD, permease protein; Pfam match to PF01032.14 FecCD; draft locus tag CAMGR0001_2517; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.970
chuD
Heme ABC transporter ChuBCD, periplasmic substrate-binding protein; Pfam match to PF01497.14 Peripla_BP_2; draft locus tags CAMGR0001_2519 and CAMGR0001_2520.
 
 
 0.953
AKT92596.1
ABC transporter, permease protein; Pfam match to PF01032.14 FecCD; draft locus tag CAMGR0001_0911; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.840
AKT92713.1
ABC transporter, permease protein; Pfam match to PF01032.14 FecCD; draft locus tag CAMGR0001_0726; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.817
AKT93409.1
ABC transporter, permease protein; Pfam match to PF01032.14 FecCD; draft locus tag CAMGR0001_2204; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.810
AKT91908.1
Flavodoxin domain protein; Pfam match to PF12641.3 Flavodoxin_3; draft locus tag CAMGR0001_2522.
  
    0.801
AKT91909.1
Putative coproporphyrinogen III oxidase; Pfam match to PF04055.17 Radical_SAM; draft locus tag CAMGR0001_2521.
       0.773
AKT92598.1
ABC transporter, periplasmic substrate-binding protein; Pfam match to PF01497.14 Peripla_BP_2; draft locus tag CAMGR0001_0908.
  
 
 0.589
AKT92597.1
ABC transporter, periplasmic substrate-binding protein; Pfam match to PF01497.14 Peripla_BP_2; draft locus tag CAMGR0001_0910.
  
 
 0.580
AKT92495.1
ABC transporter, periplasmic substrate-binding protein; Pfam match to PF01497.14 Peripla_BP_2; draft locus tag CAMGR0001_1075.
   
 
 0.524
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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