STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92001.1Metallophosphatase; Pfam match to PF00149.24 Metallophos; draft locus tag CAMGR0001_1737. (218 aa)    
Predicted Functional Partners:
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
       0.773
rimO
Radical SAM methylthiotransferase, MiaB/RimO family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.773
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.773
AKT92005.1
Putative protein (DUF883 domain); Pfam match to PF05957.9 DUF883; draft locus tag CAMGR0001_1732.
       0.515
AKT92006.1
Putative membrane protein; Draft locus tag CAMGR0001_1731.
       0.515
AKT92007.1
Hypothetical protein; Draft locus tag CAMGR0001_1730.
       0.515
hgpB
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1143.
  
     0.474
AKT92600.1
Putative protein (DUF4198 domain); Pfam match to PF10670.5 DUF4198; draft locus tag CAMGR0001_0905.
  
     0.466
AKT93483.1
Hypothetical membrane protein (DUF1440 domain); Pfam match to PF07274.8 DUF1440; draft locus tag CAMGR0001_0135.
  
     0.423
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.408
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.