STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92022.1Hypothetical protein; Draft locus tag CAMGR0001_1718. (272 aa)    
Predicted Functional Partners:
AKT93538.1
Putative PAS sensor-containing diguanylate phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00989.20 PAS; draft locus tag CAMGR0001_0214.
 
 
 0.897
AKT92023.1
HIT family protein; Pfam match to PF01230.19 HIT; draft locus tag CAMGR0001_1719.
   
   0.807
AKT91922.1
Two-component system sensor histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF00072.20 Response_reg, and to PF00512.21 HisKA, and to PF08376.6 NIT; draft locus tag CAMGR0001_2504.
 
 
 0.670
AKT91482.1
Diguanylate cyclase/phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00990.17 GGDEF; draft locus tag CAMGR0001_0279.
 
 
 0.617
AKT91821.1
PAS sensor-containing diguanylate cyclase/phosphodiesterase; Pfam matches to PF00990.17 GGDEF, and to PF00563.16 EAL, and to PF13426.2 PAS_9; draft locus tag CAMGR0001_2635.
  
 
 0.556
AKT92024.1
Major facilitator superfamily transporter; Pfam match to PF07690.12 MFS_1; draft locus tag CAMGR0001_1720.
     
 0.537
cbiK
Co/Ni ABC transporter CbiKLMQO, periplasmic substrate-binding protein CbiK; Pfam match to PF10670.5 DUF4198; draft locus tag CAMGR0001_0607.
  
     0.514
AKT92284.1
Two-component system sensor histidine kinase; Pfam match to PF02518.22 HATPase_c; draft locus tag CAMGR0001_1361.
     
 0.502
cbiQ
Co/Ni ABC transporter CbiKLMQO, membrane protein CbiQ; Draft locus tag CAMGR0001_0611.
  
     0.502
AKT92021.1
Hypothetical protein; Draft locus tag CAMGR0001_1717.
       0.498
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.