STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92060.1Terminase domain protein; Pfam matches to PF03237.11 Terminase_6, and to PF01527.16 HTH_Tnp_1; draft locus tag CAMGR0001_1670. (518 aa)    
Predicted Functional Partners:
AKT92061.1
Hypothetical protein; Draft locus tag CAMGR0001_1669.
       0.773
AKT92062.1
Hypothetical protein; Draft locus tag CAMGR0001_1668.
       0.773
AKT92074.1
Phage baseplate assembly protein J, putative; Pfam match to PF04865.10 Baseplate_J; draft locus tag CAMGR0001_1656.
 
     0.718
AKT92073.1
Phage baseplate assembly protein W; Pfam match to PF04965.10 GPW_gp25; draft locus tag CAMGR0001_1657.
 
     0.705
AKT92072.1
Phage baseplate assembly protein V; Pfam match to PF04717.8 Phage_base_V; draft locus tag CAMGR0001_1658.
 
     0.682
AKT92080.1
Phage tail sheath protein FI; Draft locus tag CAMGR0001_1651.
 
    0.678
AKT92063.1
Phage capsid portal protein, PBSX family; Pfam match to PF04860.8 Phage_portal; draft locus tag CAMGR0001_1667.
 
    0.600
AKT92087.1
Phage protein D; Draft locus tag CAMGR0001_1643.
  
     0.496
AKT92084.1
Phage tail tape measure protein, TP901 family; Pfam match to PF10145.5 PhageMin_Tail; draft locus tag CAMGR0001_1646.
  
     0.486
AKT92081.1
Phage tail tube protein FII; Pfam match to PF04985.10 Phage_tube; draft locus tag CAMGR0001_1650.
 
     0.444
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.