STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92087.1Phage protein D; Draft locus tag CAMGR0001_1643. (332 aa)    
Predicted Functional Partners:
AKT92073.1
Phage baseplate assembly protein W; Pfam match to PF04965.10 GPW_gp25; draft locus tag CAMGR0001_1657.
 
 
 0.998
AKT92080.1
Phage tail sheath protein FI; Draft locus tag CAMGR0001_1651.
 
 
 0.996
AKT92085.1
Pfam match to PF06995.7 Phage_P2_GpU; draft locus tag CAMGR0001_1645.
  
  
 0.969
AKT92072.1
Phage baseplate assembly protein V; Pfam match to PF04717.8 Phage_base_V; draft locus tag CAMGR0001_1658.
 
  
 0.968
AKT92074.1
Phage baseplate assembly protein J, putative; Pfam match to PF04865.10 Baseplate_J; draft locus tag CAMGR0001_1656.
 
  
 0.968
AKT92081.1
Phage tail tube protein FII; Pfam match to PF04985.10 Phage_tube; draft locus tag CAMGR0001_1650.
 
  
 0.966
AKT92086.1
Pfam match to PF05489.8 Phage_tail_X; draft locus tag CAMGR0001_1644.
  
  
 0.966
AKT92084.1
Phage tail tape measure protein, TP901 family; Pfam match to PF10145.5 PhageMin_Tail; draft locus tag CAMGR0001_1646.
 
  
 0.958
AKT93051.1
Peptidoglycan-binding protein LysM (BON domain); Pfam matches to PF01476.16 LysM, and to PF04972.13 BON; draft locus tag CAMGR0001_1815.
  
   0.951
AKT91512.1
Putative protein (tandem DUF1508 domains); Pfam matches to PF07411.8 DUF1508, and to PF07411.8 DUF1508; draft locus tag CAMGR0001_0321.
   
   0.950
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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