STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
damAdenine-specific DNA methyltransferase; Pfam match to PF02086.11 MethyltransfD12; draft locus tag CAMGR0001_1641. (270 aa)    
Predicted Functional Partners:
AKT92087.1
Phage protein D; Draft locus tag CAMGR0001_1643.
 
    0.884
AKT92084.1
Phage tail tape measure protein, TP901 family; Pfam match to PF10145.5 PhageMin_Tail; draft locus tag CAMGR0001_1646.
 
    0.845
AKT92085.1
Pfam match to PF06995.7 Phage_P2_GpU; draft locus tag CAMGR0001_1645.
  
    0.802
AKT92088.1
Hypothetical protein; Draft locus tag CAMGR0001_1642.
       0.773
AKT92086.1
Pfam match to PF05489.8 Phage_tail_X; draft locus tag CAMGR0001_1644.
  
    0.759
AKT92090.1
Hypothetical protein; Draft locus tag CAMGR0001_1640.
       0.565
AKT92083.1
Hypothetical protein; Draft locus tag CAMGR0001_1648.
       0.520
AKT92074.1
Phage baseplate assembly protein J, putative; Pfam match to PF04865.10 Baseplate_J; draft locus tag CAMGR0001_1656.
 
    0.475
AKT92080.1
Phage tail sheath protein FI; Draft locus tag CAMGR0001_1651.
 
    0.475
AKT92063.1
Phage capsid portal protein, PBSX family; Pfam match to PF04860.8 Phage_portal; draft locus tag CAMGR0001_1667.
  
    0.470
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.