STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92116.1Putative NADH-flavin reductase; Pfam match to PF13460.2 NAD_binding_10; draft locus tag CAMGR0001_1602. (236 aa)    
Predicted Functional Partners:
AKT92118.1
Transcriptional regulator, IscR family; Pfam match to PF02082.16 Rrf2; draft locus tag CAMGR0001_1599.
 
  
 0.685
arsP
Arsenic resistance permease; Pfam match to PF03773.9 ArsP_1; draft locus tag CAMGR0001_1033.
   
    0.578
AKT92115.1
Cupin domain-containing protein; Pfam match to PF07883.7 Cupin_2; draft locus tag CAMGR0001_1603.
       0.492
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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