STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92120.1ThiF family protein; Pfam match to PF00899.17 ThiF; draft locus tag CAMGR0001_1597. (221 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase/aminotransferase (IscS/NifS); Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_0102.
   
 0.991
moaD
Molybdopterin synthase, small subunit; Pfam match to PF02597.16 ThiS; draft locus tag CAMGR0001_1855.
  
 0.990
thiG
ThiGH complex, thiazole synthase subunit ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.919
moaE
Molybdopterin synthase, large subunit; Pfam match to PF02391.13 MoaE; draft locus tag CAMGR0001_1856.
 
 0.902
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.823
AKT92121.1
Hydrolase, carbon-nitrogen family; Pfam match to PF00795.18 CN_hydrolase; draft locus tag CAMGR0001_1596.
       0.800
metX
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
       0.800
gatA
Glu-tRNA(Gln) amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
       0.800
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.799
thiF
ThiS adenylyltransferase; Pfam matches to PF00899.17 ThiF, and to PF14453.2 ThiS-like; draft locus tag CAMGR0001_0580.
 
 
 0.683
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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