STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92141.1Low specificity D-threonine aldolase; Pfam matches to PF01168.16 Ala_racemase_N, and to PF14031.2 D-ser_dehydrat; draft locus tag CAMGR0001_1565. (368 aa)    
Predicted Functional Partners:
AKT92142.1
Hypothetical protein; Draft locus tag CAMGR0001_1564.
       0.678
AKT91659.1
PAS domain-containing transcriptional regulator, YheO family; Pfam matches to PF08348.7 PAS_6, and to PF13309.2 HTH_22; draft locus tag CAMGR0001_0628.
 
     0.521
AKT92140.1
Putative protein, putative pyrimidine dimer DNA glycosylase; Draft locus tag CAMGR0001_1566.
       0.482
AKT92143.1
Von Willebrand factor type A (vWA) domain protein; Pfam match to PF05762.10 VWA_CoxE; draft locus tag CAMGR0001_1563.
       0.476
AKT91620.1
Putative NTF2 fold immunity protein; Pfam match to PF15655.2 Imm-NTF2; draft locus tag CAMGR0001_0013.
  
     0.432
AKT91661.1
Threonine synthase, putative; Pfam match to PF00291.21 PALP; draft locus tag CAMGR0001_0625.
 
     0.427
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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