STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsECell division ATP-binding protein FtsE; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_1546. (229 aa)    
Predicted Functional Partners:
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
 
   
 0.834
rluD
23S rRNA pseudouridine synthase; Pfam matches to PF00849.18 PseudoU_synth_2, and to PF01479.21 S4; draft locus tag CAMGR0001_1543; Belongs to the pseudouridine synthase RluA family.
   
   0.815
AKT92153.1
Zinc metallopeptidase, M23 family; Pfam match to PF01551.18 Peptidase_M23; draft locus tag CAMGR0001_1548.
       0.800
trmI
tRNA m7G46 methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
      0.800
AKT92157.1
Fibronectin type III domain-containing protein; Pfam match to PF00041.17 fn3; draft locus tag CAMGR0001_1544.
       0.800
AKT92152.1
Hypothetical protein; Draft locus tag CAMGR0001_1549.
       0.773
nosF
Copper ABC transporter NosDFY, putative ATP-binding protein NosF; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2194.
  
   
 0.750
AKT92150.1
Hypothetical membrane protein (DUF3815 domain); Pfam match to PF12821.3 ThrE_2; draft locus tag CAMGR0001_1551.
       0.697
AKT92151.1
Hypothetical membrane protein (DUF1212 domain); Pfam match to PF06738.8 ThrE; draft locus tag CAMGR0001_1550.
       0.697
AKT92714.1
ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_0724.
  
   0.685
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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