STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92187.1Putative capsular polysaccharide biosynthesis protein; Draft locus tag CAMGR0001_1511. (425 aa)    
Predicted Functional Partners:
AKT92188.1
Histidinol-phosphate / aromatic aminotransferase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_1510.
      0.857
AKT92186.1
Zinc-dependent alcohol dehydrogenase; Pfam matches to PF01408.18 GFO_IDH_MocA, and to PF00107.22 ADH_zinc_N; draft locus tag CAMGR0001_1512.
 
   
 0.846
AKT92196.1
Heparinase II/III family protein; Pfam matches to PF07940.9 Hepar_II_III, and to PF16889.1 Hepar_II_III_N; draft locus tag CAMGR0001_1502.
 
     0.841
AKT92195.1
Glycosyltransferase, family 1; Pfam matches to PF00534.16 Glycos_transf_1, and to PF13439.2 Glyco_transf_4; draft locus tag CAMGR0001_1503.
 
     0.818
AKT92192.1
FemAB family protein; Pfam match to PF02388.12 FemAB; draft locus tag CAMGR0001_1506.
       0.800
aldB
Aldehyde dehydrogenase B; Pfam match to PF00171.18 Aldedh; draft locus tag CAMGR0001_2585; Belongs to the aldehyde dehydrogenase family.
  
 
 0.788
wbaP
Sugar transferase; Pfam match to PF02397.12 Bac_transf; draft locus tag CAMGR0001_1497.
       0.780
AKT92200.1
Bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Pfam matches to PF01050.14 MannoseP_isomer, and to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1498; Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.778
AKT92190.1
Polysaccharide biosynthesis protein; Pfam match to PF01943.13 Polysacc_synt; draft locus tag CAMGR0001_1508.
       0.776
AKT92194.1
Carbohydrate esterase family protein; Draft locus tag CAMGR0001_1504.
       0.776
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.