STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92190.1Polysaccharide biosynthesis protein; Pfam match to PF01943.13 Polysacc_synt; draft locus tag CAMGR0001_1508. (407 aa)    
Predicted Functional Partners:
AKT92198.1
Glycosyltransferase, family 1; Pfam matches to PF00534.16 Glycos_transf_1, and to PF13477.2 Glyco_trans_4_2; draft locus tag CAMGR0001_1500.
 
    0.850
AKT92195.1
Glycosyltransferase, family 1; Pfam matches to PF00534.16 Glycos_transf_1, and to PF13439.2 Glyco_transf_4; draft locus tag CAMGR0001_1503.
 
    0.848
wbaP
Sugar transferase; Pfam match to PF02397.12 Bac_transf; draft locus tag CAMGR0001_1497.
  
  
 0.841
AKT92184.1
UDP-N-acetylglucosamine-2-epimerase; Pfam match to PF02350.15 Epimerase_2; draft locus tag CAMGR0001_1514; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.837
AKT92191.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.13 DegT_DnrJ_EryC1; draft locus tag CAMGR0001_1507; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.830
AKT92200.1
Bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Pfam matches to PF01050.14 MannoseP_isomer, and to PF00483.19 NTP_transferase; draft locus tag CAMGR0001_1498; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.827
AKT92194.1
Carbohydrate esterase family protein; Draft locus tag CAMGR0001_1504.
 
     0.826
AKT92197.1
Glycosyltransferase, family 1; Pfam match to PF13692.2 Glyco_trans_1_4; draft locus tag CAMGR0001_1501.
  
    0.820
AKT92199.1
Glycosyltransferase, family 1; Pfam match to PF00534.16 Glycos_transf_1; draft locus tag CAMGR0001_1499.
  
    0.820
AKT92186.1
Zinc-dependent alcohol dehydrogenase; Pfam matches to PF01408.18 GFO_IDH_MocA, and to PF00107.22 ADH_zinc_N; draft locus tag CAMGR0001_1512.
  
  
 0.799
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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