STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92192.1FemAB family protein; Pfam match to PF02388.12 FemAB; draft locus tag CAMGR0001_1506. (318 aa)    
Predicted Functional Partners:
AKT92193.1
SAM-dependent methyltransferase; Pfam match to PF13489.2 Methyltransf_23; draft locus tag CAMGR0001_1505.
 
     0.803
AKT92187.1
Putative capsular polysaccharide biosynthesis protein; Draft locus tag CAMGR0001_1511.
       0.800
AKT92194.1
Carbohydrate esterase family protein; Draft locus tag CAMGR0001_1504.
     
 0.782
wbaP
Sugar transferase; Pfam match to PF02397.12 Bac_transf; draft locus tag CAMGR0001_1497.
       0.780
AKT92186.1
Zinc-dependent alcohol dehydrogenase; Pfam matches to PF01408.18 GFO_IDH_MocA, and to PF00107.22 ADH_zinc_N; draft locus tag CAMGR0001_1512.
       0.779
AKT92190.1
Polysaccharide biosynthesis protein; Pfam match to PF01943.13 Polysacc_synt; draft locus tag CAMGR0001_1508.
       0.776
AKT92191.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.13 DegT_DnrJ_EryC1; draft locus tag CAMGR0001_1507; Belongs to the DegT/DnrJ/EryC1 family.
       0.775
AKT92188.1
Histidinol-phosphate / aromatic aminotransferase; Pfam match to PF00155.17 Aminotran_1_2; draft locus tag CAMGR0001_1510.
       0.773
AKT92189.1
HAD-superfamily hydrolase, subfamily IB; Pfam match to PF12710.3 HAD; draft locus tag CAMGR0001_1509.
       0.773
AKT92195.1
Glycosyltransferase, family 1; Pfam matches to PF00534.16 Glycos_transf_1, and to PF13439.2 Glyco_transf_4; draft locus tag CAMGR0001_1503.
       0.773
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.