STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sltSoluble lytic murein transglycosylase; Pfam match to PF01464.16 SLT; draft locus tag CAMGR0001_1467. (554 aa)    
Predicted Functional Partners:
AKT92218.1
Putative membrane protein, YGGT family; Pfam match to PF02325.13 YGGT; draft locus tag CAMGR0001_1466.
       0.800
gltX1
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
       0.800
AKT92378.1
Putative membrane protein; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1228.
  
     0.599
psd
Phosphatidylserine decarboxylase, proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
     0.594
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.593
AKT92221.1
Putative nitrosative stress-response regulator NssR, Crp/Fnr family; Pfam match to PF00027.25 cNMP_binding; draft locus tag CAMGR0001_1462.
       0.587
trxC
Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189.
  
 
   0.559
AKT92222.1
Metallophosphatase; Pfam match to PF00149.24 Metallophos; draft locus tag CAMGR0001_1461.
       0.545
AKT91601.1
Tetratricopeptide repeat protein; Pfam match to PF13432.2 TPR_16; draft locus tag CAMGR0001_0038.
  
     0.505
AKT92573.1
Putative protein (DUF3971 domain); Pfam matches to PF13109.2 AsmA_1, and to PF13116.2 DUF3971; draft locus tag CAMGR0001_0945.
  
     0.498
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.