STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mscLLarge conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (133 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
   
  
 0.833
AKT92221.1
Putative nitrosative stress-response regulator NssR, Crp/Fnr family; Pfam match to PF00027.25 cNMP_binding; draft locus tag CAMGR0001_1462.
       0.790
AKT92222.1
Metallophosphatase; Pfam match to PF00149.24 Metallophos; draft locus tag CAMGR0001_1461.
       0.790
psd
Phosphatidylserine decarboxylase, proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.790
metK
Methionine adenosyltransferase; Pfam matches to PF02773.12 S-AdoMet_synt_C, and to PF00438.16 S-AdoMet_synt_N, and to PF02772.12 S-AdoMet_synt_M; draft locus tag CAMGR0001_1200; Belongs to the AdoMet synthase family.
   
    0.748
gltX1
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
     
 0.621
slt
Soluble lytic murein transglycosylase; Pfam match to PF01464.16 SLT; draft locus tag CAMGR0001_1467.
       0.593
AKT92218.1
Putative membrane protein, YGGT family; Pfam match to PF02325.13 YGGT; draft locus tag CAMGR0001_1466.
       0.593
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.551
AKT92224.1
Putative type II secretion system protein; Pfam match to PF07963.8 N_methyl; draft locus tag CAMGR0001_1459.
       0.542
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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