STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92236.1TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1442. (689 aa)    
Predicted Functional Partners:
tonB
Energy transduction protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.617
AKT92235.1
Inner membrane protein, CreD family; Pfam match to PF06123.8 CreD; draft locus tag CAMGR0001_1444.
 
    0.546
exbB
TonB system transport protein ExbB; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1441.
  
  
 0.484
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.459
exbD
TonB system transport protein ExbD; Pfam match to PF02472.12 ExbD; draft locus tag CAMGR0001_1440.
  
  
 0.452
AKT92826.1
Putative membrane protein; Draft locus tag CAMGR0001_2454.
    
 
 0.430
AKT93089.1
Hypothetical protein; Draft locus tag CAMGR0001_2798.
    
 
 0.430
hgpB
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1143.
  
  
0.429
AKT92600.1
Putative protein (DUF4198 domain); Pfam match to PF10670.5 DUF4198; draft locus tag CAMGR0001_0905.
  
     0.424
AKT93552.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236.
  
     0.418
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.