STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpCIndole-3-glycerol phosphate synthase; Pfam match to PF00218.17 IGPS; draft locus tag CAMGR0001_1434; Belongs to the TrpC family. (266 aa)    
Predicted Functional Partners:
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.999
trpDG
Anthranilate phosphoribosyltransferase / anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
  
 0.999
trpE
Anthranilate synthase component I; Pfam match to PF00425.14 Chorismate_bind; draft locus tag CAMGR0001_1886.
 
 0.998
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
 
 0.997
trpF
Phosphoribosylanthranilate isomerase; Pfam match to PF00697.18 PRAI; draft locus tag CAMGR0001_1889; Belongs to the TrpF family.
  
  
 0.898
AKT92242.1
Putative protein, predicted Fe-S cluster-containing protein; Pfam match to PF03692.11 CxxCxxCC; draft locus tag CAMGR0001_1436.
   
   0.819
AKT92240.1
NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB; Pfam match to PF07992.10 Pyr_redox_2; draft locus tag CAMGR0001_1438.
  
    0.801
trmM
tRNA m6A37 methyltransferase; Pfam match to PF05175.10 MTS; draft locus tag CAMGR0001_1437; Belongs to the methyltransferase superfamily.
       0.800
AKT92243.1
Tetratricopeptide repeat protein; Draft locus tag CAMGR0001_1435.
       0.800
pheA
Chorismate mutase / prephenate dehydratase; Bifunctional; Pfam matches to PF00800.14 PDT, and to PF01817.17 CM_2, and to PF01842.21 ACT; draft locus tag CAMGR0001_2539.
 
  
 0.694
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.