STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdCFumarate reductase, cytochrome b subunit; Pfam match to PF01127.18 Sdh_cyt; draft locus tag CAMGR0001_1422. (227 aa)    
Predicted Functional Partners:
frdA
Fumarate reductase, flavoprotein subunit; Pfam matches to PF00890.20 FAD_binding_2, and to PF02910.16 Succ_DH_flav_C; draft locus tag CAMGR0001_1421.
 
 0.999
frdB
Fumarate reductase, iron-sulfur subunit; Pfam matches to PF13085.2 Fer2_3, and to PF13183.2 Fer4_8; draft locus tag CAMGR0001_1420; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.999
mfrB
Methylmenaquinol:fumarate reductase, MfrB subunit; Pfam matches to PF13085.2 Fer2_3, and to PF13183.2 Fer4_8; draft locus tag CAMGR0001_0883.
 
 0.997
mfrA
Methylmenaquinol:fumarate reductase, MfrA subunit; Pfam matches to PF00890.20 FAD_binding_2, and to PF02910.16 Succ_DH_flav_C; draft locus tag CAMGR0001_0882.
 
 0.989
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
   
  
 0.980
AKT92735.1
Hypothetical protein; Draft locus tag CAMGR0001_2331.
  
 0.950
mfrE
Methylmenaquinol:fumarate reductase, MfrE subunit; Pfam matches to PF02754.12 CCG, and to PF02754.12 CCG; draft locus tag CAMGR0001_0884.
  
  
 0.922
AKT93437.1
Tartrate dehydratase/fumarate hydratase, alpha subunit; Pfam match to PF05681.10 Fumerase; draft locus tag CAMGR0001_2245.
  
 
 0.922
fumB
Tartrate dehydratase/fumarate hydratase, beta subunit; Pfam match to PF05683.8 Fumerase_C; draft locus tag CAMGR0001_2246.
  
 
 0.922
nosG
Menaquinol dehydrogenase NosGH, periplasmic component NosG; Pfam matches to PF12838.3 Fer4_7, and to PF00037.23 Fer4; draft locus tag CAMGR0001_2190.
   
  
 0.911
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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