STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katACatalase; Pfam matches to PF00199.15 Catalase, and to PF06628.8 Catalase-rel; draft locus tag CAMGR0001_1415. (478 aa)    
Predicted Functional Partners:
AKT92258.1
Ankyrin domain protein; Pfam match to PF12796.3 Ank_2; draft locus tag CAMGR0001_1414.
  
 0.813
msrAB
Bifunctional (RS)-methionine sulfoxide reductase A/B; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.792
ahpC
Alkyl hydroperoxide reductase protein, peroxidase component; Pfam matches to PF00578.17 AhpC-TSA, and to PF10417.5 1-cysPrx_C; draft locus tag CAMGR0001_0503.
   
 
 0.633
sodB1
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.629
sodB2
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.629
AKT93559.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam matches to PF07992.10 Pyr_redox_2, and to PF02852.18 Pyr_redox_dim; draft locus tag CAMGR0001_0247.
   
 
 0.573
ilvI
Acetolactate synthase III, valine-sensitive, catalytic (large) subunit; Pfam matches to PF02776.14 TPP_enzyme_N, and to PF02775.17 TPP_enzyme_C, and to PF00205.18 TPP_enzyme_M; draft locus tag CAMGR0001_1024.
   
 0.547
AKT93337.1
Thiamine pyrophosphate binding domain protein; Pfam matches to PF02776.14 TPP_enzyme_N, and to PF00205.18 TPP_enzyme_M, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_0394.
   
 0.547
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 
 0.521
AKT92186.1
Zinc-dependent alcohol dehydrogenase; Pfam matches to PF01408.18 GFO_IDH_MocA, and to PF00107.22 ADH_zinc_N; draft locus tag CAMGR0001_1512.
  
 
 0.507
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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