STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT92258.1Ankyrin domain protein; Pfam match to PF12796.3 Ank_2; draft locus tag CAMGR0001_1414. (162 aa)    
Predicted Functional Partners:
katA
Catalase; Pfam matches to PF00199.15 Catalase, and to PF06628.8 Catalase-rel; draft locus tag CAMGR0001_1415.
  
 0.813
AKT92269.1
Ankyrin domain protein; Pfam match to PF13637.2 Ank_4; draft locus tag CAMGR0001_1400.
  
     0.731
AKT92677.1
Hypothetical protein; Draft locus tag CAMGR0001_0781.
   
 0.539
napL
Nitrate reductase accessory protein; Draft locus tag CAMGR0001_2428.
    
 0.529
AKT92098.1
Metallophosphatase; Pfam match to PF00149.24 Metallophos; draft locus tag CAMGR0001_1631.
    
  0.516
AKT92256.1
Putative protein (ankyrin domain); Draft locus tag CAMGR0001_1416.
 
     0.494
htrA
Periplasmic heat shock serine protease HtrA, Do family; Pfam matches to PF13365.2 Trypsin_2, and to PF13180.2 PDZ_2, and to PF13180.2 PDZ_2; draft locus tag CAMGR0001_0711; Belongs to the peptidase S1C family.
  
  0.487
dnaK
DnaK system heat shock chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.475
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.470
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.470
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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