STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92275.1Autotransporter domain protein; Draft locus tag CAMGR0001_1377. (716 aa)    
Predicted Functional Partners:
hgpB
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1143.
  
 
 0.747
AKT92276.1
Hypothetical protein.
       0.675
tolR
Tol-Pal system subunit TolR; Pfam match to PF02472.12 ExbD; draft locus tag CAMGR0001_2597.
   
 
 0.628
exbD
TonB system transport protein ExbD; Pfam match to PF02472.12 ExbD; draft locus tag CAMGR0001_1440.
   
 
 0.628
tolQ
Tol-Pal system subunit TolQ; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_2598.
   
 
 0.498
exbB
TonB system transport protein ExbB; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1441.
   
 
 0.498
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.