STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92317.1Nudix-type nucleoside diphosphatase; Pfam match to PF00293.24 NUDIX; draft locus tag CAMGR0001_1313. (195 aa)    
Predicted Functional Partners:
nnrD
Carbohydrate kinase, YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
  
 0.972
mgtE
Mg/Co/Ni transporter, MgtE family; Acts as a magnesium transporter.
       0.800
AKT92315.1
Zinc metallopeptidase, M23 family; Pfam match to PF01551.18 Peptidase_M23; draft locus tag CAMGR0001_1315.
       0.795
rnr
Pfam match to PF00773.15 RNB; draft locus tag CAMGR0001_1990.
   
 0.746
AKT92313.1
Gycolate oxidase, subunit GlcD-related protein; Pfam matches to PF02913.15 FAD-oxidase_C, and to PF01565.19 FAD_binding_4; draft locus tag CAMGR0001_1317.
       0.581
AKT92314.1
Putative protein (PgbA domain); Pfam match to PF15436.2 PGBA_N; draft locus tag CAMGR0001_1316.
       0.581
AKT92318.1
Alpha/beta hydrolase family protein; Pfam match to PF12695.3 Abhydrolase_5; draft locus tag CAMGR0001_1312.
       0.576
AKT92157.1
Fibronectin type III domain-containing protein; Pfam match to PF00041.17 fn3; draft locus tag CAMGR0001_1544.
  
     0.507
htrA
Periplasmic heat shock serine protease HtrA, Do family; Pfam matches to PF13365.2 Trypsin_2, and to PF13180.2 PDZ_2, and to PF13180.2 PDZ_2; draft locus tag CAMGR0001_0711; Belongs to the peptidase S1C family.
    
  0.423
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.422
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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