STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92321.1SAM-dependent methyltransferase, MidA family; Pfam matches to PF02636.13 Methyltransf_28, and to PF02636.13 Methyltransf_28; draft locus tag CAMGR0001_1309. (365 aa)    
Predicted Functional Partners:
nuoD
NADH:quinone oxidoreductase I, chain D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
 
 
 0.925
nuoC
NADH:quinone oxidoreductase I, chain C; Pfam match to PF00329.15 Complex1_30kDa; draft locus tag CAMGR0001_2686.
 
 
 0.900
nuoB
NADH:quinone oxidoreductase I, chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
 0.857
AKT92324.1
Putative protein (DUF2400 domain); Pfam match to PF09674.6 DUF2400; draft locus tag CAMGR0001_1306.
 
     0.832
argD
N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase; Bifunctional; Pfam match to PF00202.17 Aminotran_3; draft locus tag CAMGR0001_1310; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
   0.819
AKT92322.1
Hypothetical protein; Draft locus tag CAMGR0001_1308.
   
   0.819
nuoG
NADH:quinone oxidoreductase I, chain G; Pfam matches to PF13510.2 Fer2_4, and to PF10588.5 NADH-G_4Fe-4S_3; draft locus tag CAMGR0001_2682.
  
 
  0.810
mrp
ATP/GTP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.807
AKT92319.1
Hypothetical membrane protein (UPF0126 domain); Pfam matches to PF03458.9 UPF0126, and to PF03458.9 UPF0126; draft locus tag CAMGR0001_1311.
       0.800
AKT92323.1
RNA methyltransferase, RsmD family; Pfam matches to PF03602.11 Cons_hypoth95, and to PF03602.11 Cons_hypoth95; draft locus tag CAMGR0001_1307.
       0.800
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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