STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
focFormate/nitrite transporter; Pfam match to PF01226.13 Form_Nir_trans; draft locus tag CAMGR0001_1287. (287 aa)    
Predicted Functional Partners:
canB
Carbonic anhydrase, beta class; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.841
hyfI
Hydrogenase-4, component I; Pfam match to PF01058.18 Oxidored_q6; draft locus tag CAMGR0001_1284.
     
 0.821
hyfE
Hydrogenase-4, membrane component E; Pfam match to PF00420.20 Oxidored_q2; draft locus tag CAMGR0001_1280.
     
 0.820
hyfG
Hydrogenase-4, component G; Pfam matches to PF00346.15 Complex1_49kDa, and to PF00329.15 Complex1_30kDa, and to PF00374.15 NiFeSe_Hases, and to PF00346.15 Complex1_49kDa; draft locus tag CAMGR0001_1282.
     
 0.812
hyfF
Hydrogenase-4, component F; Pfam matches to PF00361.16 Proton_antipo_M, and to PF00662.16 Proton_antipo_N; draft locus tag CAMGR0001_1281.
     
 0.811
hyfB
Hydrogenase-4, component B; Pfam match to PF00361.16 Proton_antipo_M; draft locus tag CAMGR0001_1278.
  
  
 0.808
hyfC
Hydrogenase-4, component C; Pfam match to PF00146.17 NADHdh; draft locus tag CAMGR0001_1279.
     
 0.805
hyfA
Hydrogenase-4, component A; Pfam match to PF13247.2 Fer4_11; draft locus tag CAMGR0001_1277.
  
  
 0.802
hycI
Hydrogenase maturation protease; Draft locus tag CAMGR0001_1286.
       0.800
hycH
Formate hydrogenlyase family maturation protein; Pfam match to PF07450.7 HycH; draft locus tag CAMGR0001_1285.
       0.799
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.