STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92350.1Transcriptional regulator, BadM/Rrf2 family; Pfam match to PF02082.16 Rrf2; draft locus tag CAMGR0001_1267. (137 aa)    
Predicted Functional Partners:
AKT92348.1
Hypothetical protein; Draft locus tag CAMGR0001_1269.
       0.800
AKT92349.1
DHH-type phosphohydrolase; Draft locus tag CAMGR0001_1268.
       0.800
iscS
Cysteine desulfurase/aminotransferase (IscS/NifS); Pfam match to PF00266.15 Aminotran_5; draft locus tag CAMGR0001_0102.
  
  
 0.790
AKT92540.1
Transcriptional regulator, IscR family; Pfam match to PF02082.16 Rrf2; draft locus tag CAMGR0001_0999.
  
     0.770
iscU
Iron-sulfur cluster assembly scaffold protein IscU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.740
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.597
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
  
  
 0.439
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.