STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92378.1Putative membrane protein; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1228. (429 aa)    
Predicted Functional Partners:
AKT92379.1
Putative protein (OmpA/MotB domain); Pfam match to PF00691.16 OmpA; draft locus tag CAMGR0001_1227.
 
 
   0.950
AKT92642.1
Lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE; Pfam match to PF02405.12 MlaE; draft locus tag CAMGR0001_0843.
  
 
 0.925
AKT92641.1
Lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_0844.
  
 
 0.872
fbaA
Fructose-bisphosphate aldolase, class IIA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
       0.800
peb4
SurA-like chaperone / peptidyl-prolyl cis-trans isomerase; Pfam match to PF13145.2 Rotamase_2; draft locus tag CAMGR0001_1230.
       0.768
trxC
Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189.
  
     0.763
AKT92573.1
Putative protein (DUF3971 domain); Pfam matches to PF13109.2 AsmA_1, and to PF13116.2 DUF3971; draft locus tag CAMGR0001_0945.
  
     0.757
AKT91601.1
Tetratricopeptide repeat protein; Pfam match to PF13432.2 TPR_16; draft locus tag CAMGR0001_0038.
  
     0.727
ttg2D
Lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC; Pfam match to PF05494.8 MlaC; draft locus tag CAMGR0001_2645.
 
 
 0.681
dut
dUTPase, dimeric; Pfam match to PF08761.7 dUTPase_2; draft locus tag CAMGR0001_2476.
  
     0.679
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.