STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT92379.1Putative protein (OmpA/MotB domain); Pfam match to PF00691.16 OmpA; draft locus tag CAMGR0001_1227. (340 aa)    
Predicted Functional Partners:
AKT92378.1
Putative membrane protein; Pfam match to PF01618.12 MotA_ExbB; draft locus tag CAMGR0001_1228.
 
 
   0.950
fbaA
Fructose-bisphosphate aldolase, class IIA; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
    0.806
peb4
SurA-like chaperone / peptidyl-prolyl cis-trans isomerase; Pfam match to PF13145.2 Rotamase_2; draft locus tag CAMGR0001_1230.
 
   
 0.798
tolB
Tol-Pal system translocation protein TolB; Draft locus tag CAMGR0001_2594.
  
 
 0.640
ftsX
Cell division protein FtsX; Draft locus tag CAMGR0001_1547.
 
 
 
 0.640
mltD
Membrane-bound lytic murein transglycosylase D; Pfam match to PF01464.16 SLT; draft locus tag CAMGR0001_1133.
   
 
 0.623
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
   
   0.610
trxC
Putative periplasmic thioredoxin; Draft locus tag CAMGR0001_1189.
  
 
 
 0.604
AKT91507.1
Peptidase, M48 family; Pfam match to PF01435.14 Peptidase_M48; draft locus tag CAMGR0001_0313.
   
 
 0.600
por
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Pfam matches to PF01855.15 POR_N, and to PF01558.14 POR, and to PF10371.5 EKR, and to PF12838.3 Fer4_7, and to PF02775.17 TPP_enzyme_C; draft locus tag CAMGR0001_2171.
  
   0.569
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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